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Basics
| Name | Haeun (Hannah) Hwangbo |
| Label | Computational Biologist |
| hhwangbo@unc.edu |
Work
- 2023.06 - 2023.08
- 2019.08 - Present
- 2018.03 - 2019.06
- 2016.06 - 2017.06
Education
Skills
| Programming | |
| Python (pandas, numpy, scikit-learn, matplotib, seaborn, lifelines) | |
| R (bioconductor, ggplot2) | |
| bash | |
| Linux CLI | |
| C | |
| MATLAB | |
| Mathematica | |
| SQL |
| Data Reproducibility/Cloud Computing | |
| Version Control (Git) | |
| Docker | |
| Workflow (GNU make, snakemake, nextflow) | |
| HPC systems | |
| AWS |
| Bioinformatics | |
| WGS/WES (variant calling, copy number variation) | |
| RNA-seq (differential expression, differential splicing, trajectory analysis) | |
| ATAC-seq (differential accessibility, motif analysis) | |
| scATAC-seq (clustering, trajectory analysis) | |
| Proteomics (differential expression, pathway analysis) | |
| CRISPR-KO | |
| dose-response analysis | |
| High-throughput screening |
| Public Databases | |
| TCGA | |
| GTEx | |
| CCLE | |
| Connectivity Map | |
| GDSC | |
| CTRPv2 | |
| COSMIC | |
| DepMap |
| Machine Learning/Statistics | |
| regression analysis | |
| generalized linear model | |
| clustering | |
| classification | |
| random forest | |
| dimensionality reduction | |
| survival analysis | |
| design & analysis of clinical trials |
Languages
| Korean | |
| Native speaker |
| English | |
| Fluent |
Interests
| Computational Biology | |
| Multi-omics | |
| Survival Analysis | |
| Data Visualization |
| Oncology | |
| Combination Therapy | |
| Drug-Drug Interaction | |
| Drug Resistance | |
| Intra/Inter-tumor Heterogeneity | |
| Biomarker Discovery |