cv
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Basics
Name | Haeun (Hannah) Hwangbo |
Label | Computational Biologist |
hhwangbo@unc.edu |
Work
- 2023.06 - 2023.08
- 2019.08 - Present
- 2018.03 - 2019.06
- 2016.06 - 2017.06
Education
Skills
Programming | |
Python (pandas, numpy, scikit-learn, matplotib, seaborn, lifelines) | |
R (bioconductor, ggplot2) | |
bash | |
Linux CLI | |
C | |
MATLAB | |
Mathematica | |
SQL |
Data Reproducibility/Cloud Computing | |
Version Control (Git) | |
Docker | |
Workflow (GNU make, snakemake, nextflow) | |
HPC systems | |
AWS |
Bioinformatics | |
WGS/WES (variant calling, copy number variation) | |
RNA-seq (differential expression, differential splicing, trajectory analysis) | |
ATAC-seq (differential accessibility, motif analysis) | |
scATAC-seq (clustering, trajectory analysis) | |
Proteomics (differential expression, pathway analysis) | |
CRISPR-KO | |
dose-response analysis | |
High-throughput screening |
Public Databases | |
TCGA | |
GTEx | |
CCLE | |
Connectivity Map | |
GDSC | |
CTRPv2 | |
COSMIC | |
DepMap |
Machine Learning/Statistics | |
regression analysis | |
generalized linear model | |
clustering | |
classification | |
random forest | |
dimensionality reduction | |
survival analysis | |
design & analysis of clinical trials |
Languages
Korean | |
Native speaker |
English | |
Fluent |
Interests
Computational Biology | |
Multi-omics | |
Survival Analysis | |
Data Visualization |
Oncology | |
Combination Therapy | |
Drug-Drug Interaction | |
Drug Resistance | |
Intra/Inter-tumor Heterogeneity | |
Biomarker Discovery |